Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chd3B1AR17 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.91■□□□□ 0.3
Chd3B1AR17 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.91■□□□□ 0.3
Chd3B1AR17 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chd3B1AR17 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 AA414768-201ENSMUST00000121924 1257 ntBASIC16.9■□□□□ 0.3
Chd3B1AR17 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd3B1AR17 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.9■□□□□ 0.3
Chd3B1AR17 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chd3B1AR17 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Chd3B1AR17 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chd3B1AR17 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Gm22697-201ENSMUST00000175194 63 ntBASIC16.89■□□□□ 0.29
Chd3B1AR17 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chd3B1AR17 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chd3B1AR17 Actl10-202ENSMUST00000226583 1501 ntBASIC16.89■□□□□ 0.29
Chd3B1AR17 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Chd3B1AR17 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Chd3B1AR17 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.89■□□□□ 0.29
Chd3B1AR17 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.89■□□□□ 0.29
Chd3B1AR17 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd3B1AR17 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd3B1AR17 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Chd3B1AR17 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Chd3B1AR17 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd3B1AR17 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chd3B1AR17 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd3B1AR17 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd3B1AR17 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd3B1AR17 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chd3B1AR17 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd3B1AR17 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd3B1AR17 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chd3B1AR17 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chd3B1AR17 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd3B1AR17 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.87■□□□□ 0.29
Chd3B1AR17 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.87■□□□□ 0.29
Chd3B1AR17 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms