Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc194A0A140LIT1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc194A0A140LIT1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Ccdc194A0A140LIT1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc194A0A140LIT1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
Ccdc194A0A140LIT1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc194A0A140LIT1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Gm15375-201ENSMUST00000119510 849 ntBASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc194A0A140LIT1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Dio3-201ENSMUST00000097228 1449 ntBASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc194A0A140LIT1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Gm12896-201ENSMUST00000118430 226 ntBASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc194A0A140LIT1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc194A0A140LIT1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms