Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv20A0A0B4J1H5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv20A0A0B4J1H5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm10418-201ENSMUST00000100943 576 ntBASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv20A0A0B4J1H5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm43017-201ENSMUST00000198296 752 ntBASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv20A0A0B4J1H5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv20A0A0B4J1H5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv20A0A0B4J1H5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv20A0A0B4J1H5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv20A0A0B4J1H5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.46■□□□□ 0.06
Trbv20A0A0B4J1H5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms