Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv3A0A0A6YYE2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.34□□□□□ -0.27
Trbv3A0A0A6YYE2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trbv3A0A0A6YYE2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trbv3A0A0A6YYE2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trbv3A0A0A6YYE2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm26833-201ENSMUST00000180899 440 ntBASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trbv3A0A0A6YYE2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm40848-201ENSMUST00000221998 324 ntBASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trbv3A0A0A6YYE2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trbv3A0A0A6YYE2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms