Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-4A0A075B6B4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.29□□□□□ -0.28
Trav6-4A0A075B6B4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-4A0A075B6B4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-4A0A075B6B4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-4A0A075B6B4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-4A0A075B6B4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trav6-4A0A075B6B4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms