Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6n-7A0A075B6A6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6n-7A0A075B6A6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm38027-201ENSMUST00000192315 235 ntBASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Odf3b-204ENSMUST00000227834 930 ntBASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms