Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4-2A0A075B638 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trav4-2A0A075B638 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trav4-2A0A075B638 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Gm21956-201ENSMUST00000179946 522 ntBASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Gm38285-201ENSMUST00000192928 922 ntBASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4-2A0A075B638 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav4-2A0A075B638 Gm12821-201ENSMUST00000120022 600 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms