Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Mir2861-201ENSMUST00000175539 82 ntBASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Timm23-208ENSMUST00000226683 750 ntBASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13d-1A0A075B606 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Gm30025-201ENSMUST00000218555 728 ntBASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13d-1A0A075B606 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13d-1A0A075B606 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13d-1A0A075B606 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13d-1A0A075B606 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms