Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.31■□□□□ 0.36
Trbv4A0A075B5I2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Trbv4A0A075B5I2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv4A0A075B5I2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv4A0A075B5I2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trbv4A0A075B5I2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv4A0A075B5I2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv4A0A075B5I2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv4A0A075B5I2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trbv4A0A075B5I2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trbv4A0A075B5I2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Gm37025-201ENSMUST00000195159 829 ntBASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv4A0A075B5I2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms