Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm44871-201ENSMUST00000207821 497 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm44852-201ENSMUST00000207950 369 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm23516-201ENSMUST00000093728 107 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
H2afb1S4R1E0 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
H2afb1S4R1E0 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm22269-201ENSMUST00000104002 130 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm25765-201ENSMUST00000104100 132 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm11393-201ENSMUST00000118019 288 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm11268-201ENSMUST00000118347 267 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm12935-201ENSMUST00000119352 246 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm14570-201ENSMUST00000119444 391 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm26148-201ENSMUST00000157430 68 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm22816-201ENSMUST00000157450 117 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm22390-201ENSMUST00000157588 325 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm26173-201ENSMUST00000158416 136 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm6374-201ENSMUST00000159051 788 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm28390-201ENSMUST00000185212 700 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm6947-201ENSMUST00000186254 78 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm32447-201ENSMUST00000194265 697 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm44099-201ENSMUST00000203299 112 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm35857-201ENSMUST00000212739 178 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm23939-201ENSMUST00000082880 133 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
H2afb1S4R1E0 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm12568-201ENSMUST00000117362 624 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm11406-201ENSMUST00000117418 484 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm12782-201ENSMUST00000117519 727 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm15613-201ENSMUST00000118396 326 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm14358-201ENSMUST00000118458 403 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm23228-201ENSMUST00000157296 270 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm24551-201ENSMUST00000158645 92 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm23025-201ENSMUST00000158769 111 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Mir3112-201ENSMUST00000175431 82 ntBASIC3.26□□□□□ -1.89
H2afb1S4R1E0 Gm7438-201ENSMUST00000177664 639 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms