Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm18704-201ENSMUST00000219736 446 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Gm5176-202ENSMUST00000220267 583 ntBASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Smarcb1Q9Z0H3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Smarcb1Q9Z0H3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Smarcb1Q9Z0H3 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm22019-201ENSMUST00000104359 96 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm11446-201ENSMUST00000121319 866 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm2092-201ENSMUST00000178887 639 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm2759-201ENSMUST00000179938 639 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm37219-201ENSMUST00000192036 926 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm19620-201ENSMUST00000195972 434 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm7726-201ENSMUST00000206241 231 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm45400-201ENSMUST00000211603 653 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm19232-201ENSMUST00000211621 652 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm18225-201ENSMUST00000216708 742 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Gm22249-201ENSMUST00000082485 136 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Mir325-201ENSMUST00000083491 98 ntBASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm15399-201ENSMUST00000118055 724 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm11598-201ENSMUST00000119257 357 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm16274-201ENSMUST00000139251 592 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm17063-201ENSMUST00000168135 456 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm24350-202ENSMUST00000198309 132 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Smarcb1Q9Z0H3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm24890-201ENSMUST00000104389 102 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm22718-201ENSMUST00000122701 315 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm23587-201ENSMUST00000157658 84 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm23205-201ENSMUST00000158671 103 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm23402-201ENSMUST00000178130 107 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm7142-201ENSMUST00000194232 586 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm44393-201ENSMUST00000197418 138 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm26437-201ENSMUST00000082595 105 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm23975-201ENSMUST00000082685 106 ntBASIC3.13□□□□□ -1.91
Smarcb1Q9Z0H3 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms