Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm26015-201ENSMUST00000104402 125 ntBASIC2.58□□□□□ -2
Scn8aQ9WTU3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Scn8aQ9WTU3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Scn8aQ9WTU3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.58□□□□□ -2
Scn8aQ9WTU3 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn8aQ9WTU3 Gm22227-201ENSMUST00000157356 259 ntBASIC2.58□□□□□ -2
Scn8aQ9WTU3 Mir6363-201ENSMUST00000184880 114 ntBASIC2.58□□□□□ -2
Scn8aQ9WTU3 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn8aQ9WTU3 Mir1892-201ENSMUST00000197752 80 ntBASIC2.58□□□□□ -2
Scn8aQ9WTU3 Gm44320-201ENSMUST00000199276 86 ntBASIC2.58□□□□□ -2
Scn8aQ9WTU3 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.58□□□□□ -2
Scn8aQ9WTU3 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC2.58□□□□□ -2
Scn8aQ9WTU3 Gm7540-201ENSMUST00000219764 926 ntBASIC2.58□□□□□ -2
Scn8aQ9WTU3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Scn8aQ9WTU3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn8aQ9WTU3 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm25863-201ENSMUST00000158249 329 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm7094-201ENSMUST00000178379 366 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm23963-201ENSMUST00000179603 77 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm38214-201ENSMUST00000192581 988 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm37533-201ENSMUST00000193848 545 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm7407-201ENSMUST00000208301 568 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2.57□□□□□ -2
Scn8aQ9WTU3 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn8aQ9WTU3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.57□□□□□ -2
Scn8aQ9WTU3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Scn8aQ9WTU3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm22674-201ENSMUST00000104413 131 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm25529-201ENSMUST00000104850 92 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm19694-201ENSMUST00000192364 505 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm11350-201ENSMUST00000121436 870 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm24212-201ENSMUST00000158258 132 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm26238-201ENSMUST00000175538 117 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm27468-201ENSMUST00000183577 106 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm27427-201ENSMUST00000185134 193 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm22622-201ENSMUST00000082870 129 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Gm23847-201ENSMUST00000083829 110 ntBASIC2.56□□□□□ -2
Scn8aQ9WTU3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn8aQ9WTU3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.55□□□□□ -2
Scn8aQ9WTU3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm13862-201ENSMUST00000121220 197 ntBASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm9890-201ENSMUST00000171867 537 ntBASIC2.55□□□□□ -2
Scn8aQ9WTU3 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.55□□□□□ -2
Scn8aQ9WTU3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.55□□□□□ -2
Scn8aQ9WTU3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.55□□□□□ -2
Scn8aQ9WTU3 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm10343-201ENSMUST00000096279 348 ntBASIC2.55□□□□□ -2
Scn8aQ9WTU3 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.54□□□□□ -2
Scn8aQ9WTU3 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.54□□□□□ -2
Scn8aQ9WTU3 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.54□□□□□ -2
Scn8aQ9WTU3 Gm16232-201ENSMUST00000162856 167 ntBASIC2.54□□□□□ -2
Scn8aQ9WTU3 Gm25642-201ENSMUST00000175137 66 ntBASIC2.54□□□□□ -2
Scn8aQ9WTU3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn8aQ9WTU3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.54□□□□□ -2
Scn8aQ9WTU3 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC2.54□□□□□ -2
Scn8aQ9WTU3 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.54□□□□□ -2
Scn8aQ9WTU3 Gm46234-201ENSMUST00000218702 259 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms