Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Snord72-201ENSMUST00000104549 81 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Mir875-201ENSMUST00000104698 78 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm12683-201ENSMUST00000117528 415 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm14560-201ENSMUST00000118672 375 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm12237-201ENSMUST00000120158 470 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm13153-201ENSMUST00000120969 637 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm14841-201ENSMUST00000121067 758 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm7308-201ENSMUST00000121087 447 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm22106-201ENSMUST00000122544 127 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm26149-201ENSMUST00000157432 108 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm23993-201ENSMUST00000157478 144 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm24858-201ENSMUST00000158058 323 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm17152-201ENSMUST00000172430 535 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm27747-201ENSMUST00000184707 85 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm6651-201ENSMUST00000189471 271 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm37421-201ENSMUST00000193088 132 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm37659-201ENSMUST00000194574 111 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm4321-201ENSMUST00000200520 442 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm8940-201ENSMUST00000212585 219 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm24525-201ENSMUST00000082917 151 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm23678-201ENSMUST00000083157 107 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gm23461-201ENSMUST00000083265 107 ntBASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Prpf40aQ9R1C7 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gm25621-201ENSMUST00000157223 114 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gm25341-201ENSMUST00000157461 268 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gm22257-201ENSMUST00000158687 301 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Igkv4-65-201ENSMUST00000196986 358 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gm18453-201ENSMUST00000208000 626 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gm20039-201ENSMUST00000210329 394 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gm17999-201ENSMUST00000211568 542 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 AC165157.3-201ENSMUST00000220815 103 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Prpf40aQ9R1C7 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm24170-201ENSMUST00000104124 133 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm11313-201ENSMUST00000118779 432 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm14694-201ENSMUST00000121856 282 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm23545-201ENSMUST00000158205 104 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm16114-201ENSMUST00000161930 300 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm17162-201ENSMUST00000168538 473 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm24862-201ENSMUST00000179103 79 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm23310-201ENSMUST00000179105 79 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm25461-201ENSMUST00000179293 79 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm29262-201ENSMUST00000190084 196 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm45327-201ENSMUST00000211612 565 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm18904-201ENSMUST00000218756 329 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.61□□□□□ -1.51
Prpf40aQ9R1C7 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Prpf40aQ9R1C7 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms