Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Gm29356-201ENSMUST00000186935 373 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Scn11aQ9R053 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.05□□□□□ -1.92
Scn11aQ9R053 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Scn11aQ9R053 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Scn11aQ9R053 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Scn11aQ9R053 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Scn11aQ9R053 Gm13756-201ENSMUST00000117618 222 ntBASIC3.04□□□□□ -1.92
Scn11aQ9R053 Gm13555-201ENSMUST00000121668 319 ntBASIC3.04□□□□□ -1.92
Scn11aQ9R053 Gm26277-201ENSMUST00000157097 152 ntBASIC3.04□□□□□ -1.92
Scn11aQ9R053 Gm23548-201ENSMUST00000158963 106 ntBASIC3.04□□□□□ -1.92
Scn11aQ9R053 Mir7225-201ENSMUST00000184178 54 ntBASIC3.04□□□□□ -1.92
Scn11aQ9R053 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.04□□□□□ -1.92
Scn11aQ9R053 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Scn11aQ9R053 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.04□□□□□ -1.92
Scn11aQ9R053 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
Scn11aQ9R053 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Scn11aQ9R053 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Scn11aQ9R053 Gm14659-201ENSMUST00000117667 843 ntBASIC3.03□□□□□ -1.92
Scn11aQ9R053 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Scn11aQ9R053 Gm12443-201ENSMUST00000122308 323 ntBASIC3.03□□□□□ -1.92
Scn11aQ9R053 Mir6997-201ENSMUST00000184313 71 ntBASIC3.03□□□□□ -1.92
Scn11aQ9R053 Gm29556-201ENSMUST00000187591 696 ntBASIC3.03□□□□□ -1.92
Scn11aQ9R053 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.03□□□□□ -1.92
Scn11aQ9R053 Gm32175-201ENSMUST00000193641 346 ntBASIC3.03□□□□□ -1.92
Scn11aQ9R053 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.03□□□□□ -1.92
Scn11aQ9R053 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Scn11aQ9R053 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Scn11aQ9R053 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Scn11aQ9R053 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.93
Scn11aQ9R053 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm11285-201ENSMUST00000118443 322 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm22257-201ENSMUST00000158687 301 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm27991-201ENSMUST00000184804 137 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Scn11aQ9R053 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Scn11aQ9R053 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm14912-201ENSMUST00000120166 1773 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm23010-201ENSMUST00000104151 126 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm14877-201ENSMUST00000119803 478 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm16533-201ENSMUST00000140035 228 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm7592-201ENSMUST00000160674 627 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm20542-201ENSMUST00000174582 372 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Mir7039-201ENSMUST00000183852 85 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm42828-201ENSMUST00000199669 469 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm44408-201ENSMUST00000200205 66 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm18015-201ENSMUST00000214879 316 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 AC158622.1-201ENSMUST00000217107 230 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.02□□□□□ -1.93
Scn11aQ9R053 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.01□□□□□ -1.93
Scn11aQ9R053 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gm11943-201ENSMUST00000119473 327 ntBASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gm17072-201ENSMUST00000166673 658 ntBASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gm19257-201ENSMUST00000186121 183 ntBASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.01□□□□□ -1.93
Scn11aQ9R053 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.01□□□□□ -1.93
Scn11aQ9R053 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.01□□□□□ -1.93
Scn11aQ9R053 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.01□□□□□ -1.93
Scn11aQ9R053 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Scn11aQ9R053 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Scn11aQ9R053 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Scn11aQ9R053 Gm14125-201ENSMUST00000113442 680 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3□□□□□ -1.93
Scn11aQ9R053 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3□□□□□ -1.93
Scn11aQ9R053 Gm26004-201ENSMUST00000158804 116 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm18558-201ENSMUST00000186253 1214 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm18698-201ENSMUST00000192327 668 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3□□□□□ -1.93
Scn11aQ9R053 AC158631.1-201ENSMUST00000219202 138 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 CT009754.4-201ENSMUST00000221430 565 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 AC131029.2-202ENSMUST00000228430 496 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm10212-201ENSMUST00000087884 324 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Scn11aQ9R053 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Scn11aQ9R053 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Scn11aQ9R053 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3□□□□□ -1.93
Scn11aQ9R053 Gm23472-201ENSMUST00000101806 191 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm23385-201ENSMUST00000158592 295 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm17711-201ENSMUST00000172028 237 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm24497-201ENSMUST00000177868 191 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3□□□□□ -1.93
Scn11aQ9R053 Gm25939-201ENSMUST00000179876 191 ntBASIC3□□□□□ -1.93
Scn11aQ9R053 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms