Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm19257-201ENSMUST00000186121 183 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm32340-201ENSMUST00000192883 259 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm44223-201ENSMUST00000204854 114 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm8681-201ENSMUST00000219115 618 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Gm22970-201ENSMUST00000083304 186 ntBASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.24□□□□□ -2.05
Trem3Q9JKE1 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm22590-201ENSMUST00000104247 128 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm13329-201ENSMUST00000117063 265 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm11285-201ENSMUST00000118443 322 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm14901-201ENSMUST00000119001 283 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm15272-201ENSMUST00000120865 233 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm24520-201ENSMUST00000179510 110 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm6113-201ENSMUST00000180319 639 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm27921-201ENSMUST00000183968 108 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm19030-201ENSMUST00000194947 552 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm44348-201ENSMUST00000200165 122 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm43967-201ENSMUST00000203787 301 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm43954-201ENSMUST00000204634 544 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm25592-201ENSMUST00000082635 131 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm23447-201ENSMUST00000082798 163 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Gm23847-201ENSMUST00000083829 110 ntBASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trem3Q9JKE1 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm26341-201ENSMUST00000104561 134 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Mir878-201ENSMUST00000104680 78 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm2066-201ENSMUST00000118046 389 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm11356-201ENSMUST00000118974 192 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm2318-201ENSMUST00000119623 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm14716-201ENSMUST00000120138 718 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm2005-201ENSMUST00000120759 542 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm23667-201ENSMUST00000157466 120 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm24190-201ENSMUST00000157976 216 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Mir5136-201ENSMUST00000175573 76 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm7438-201ENSMUST00000177664 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm7408-201ENSMUST00000178014 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm7386-201ENSMUST00000178020 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm3657-201ENSMUST00000178170 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm7415-201ENSMUST00000178205 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm7398-201ENSMUST00000178589 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm7391-201ENSMUST00000178680 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm7375-201ENSMUST00000179232 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Gm3681-201ENSMUST00000179940 639 ntBASIC2.22□□□□□ -2.05
Trem3Q9JKE1 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trem3Q9JKE1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms