Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm24160-201ENSMUST00000104594 126 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm23178-201ENSMUST00000116782 95 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm23990-201ENSMUST00000117031 117 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm15772-201ENSMUST00000118533 438 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm14591-201ENSMUST00000120407 518 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm28288-201ENSMUST00000191019 214 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm44076-201ENSMUST00000203072 520 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm19196-201ENSMUST00000209258 357 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Supt4b-201ENSMUST00000214434 351 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm24045-201ENSMUST00000083113 98 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm43871-201ENSMUST00000204931 1955 ntBASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ube3bQ9ES34 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm42481-201ENSMUST00000196822 2178 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 AC133079.1-201ENSMUST00000220943 1881 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm24578-201ENSMUST00000103970 129 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm24120-201ENSMUST00000103978 129 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm14537-201ENSMUST00000117464 599 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm11822-201ENSMUST00000119177 415 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm14119-201ENSMUST00000119511 235 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm6574-201ENSMUST00000120037 362 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm22026-201ENSMUST00000122735 281 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm25058-201ENSMUST00000157365 128 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm26404-201ENSMUST00000158498 109 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm2962-201ENSMUST00000159266 336 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Mir3090-201ENSMUST00000175597 87 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm16378-201ENSMUST00000179168 342 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm27545-201ENSMUST00000184755 202 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm29657-201ENSMUST00000189807 342 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm20039-201ENSMUST00000210329 394 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 AC188459.1-201ENSMUST00000216651 300 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 AC125543.1-201ENSMUST00000222778 101 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm5265-201ENSMUST00000076828 342 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm37802-201ENSMUST00000194998 2643 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 AC139218.1-201ENSMUST00000228215 4287 ntBASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ube3bQ9ES34 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm19666-201ENSMUST00000198176 1893 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC6□□□□□ -1.45
Ube3bQ9ES34 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm12852-201ENSMUST00000119478 719 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm25846-201ENSMUST00000158013 135 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm27465-201ENSMUST00000184290 91 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm29352-201ENSMUST00000188054 544 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm26204-201ENSMUST00000082906 107 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ube3bQ9ES34 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm19514-201ENSMUST00000206856 4489 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ube3bQ9ES34 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC6□□□□□ -1.45
Ube3bQ9ES34 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Gm5347-201ENSMUST00000210542 2327 ntBASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.99□□□□□ -1.45
Ube3bQ9ES34 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms