Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mir6952-201ENSMUST00000185092 61 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm28399-201ENSMUST00000186221 318 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm28572-201ENSMUST00000187444 318 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm29365-201ENSMUST00000189461 699 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm28921-201ENSMUST00000190219 378 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm8939-201ENSMUST00000192577 964 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm37801-201ENSMUST00000194754 274 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm42694-201ENSMUST00000196951 358 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm43078-201ENSMUST00000197222 168 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm29884-201ENSMUST00000218403 453 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm25812-201ENSMUST00000082751 103 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm26497-201ENSMUST00000083146 107 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Mir20a-201ENSMUST00000083508 107 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Mir375-201ENSMUST00000083682 64 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim42Q9D2H5 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.12□□□□□ -1.59
Trim42Q9D2H5 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Neat1-201ENSMUST00000173672 20771 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm22831-201ENSMUST00000102473 109 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm23746-201ENSMUST00000104229 125 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Mir879-201ENSMUST00000104703 76 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm15012-201ENSMUST00000119176 106 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm22959-201ENSMUST00000122514 303 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm26348-201ENSMUST00000157528 240 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm22891-201ENSMUST00000158641 164 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm27688-201ENSMUST00000183634 91 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm27997-201ENSMUST00000184942 69 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm28640-201ENSMUST00000190918 550 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Igkv13-76-201ENSMUST00000197621 347 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm43529-201ENSMUST00000199178 412 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm2040-201ENSMUST00000202979 289 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm44768-201ENSMUST00000205719 393 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm45367-201ENSMUST00000210171 347 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Gm25207-201ENSMUST00000093745 107 ntBASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim42Q9D2H5 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm14627-201ENSMUST00000118931 567 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm14940-201ENSMUST00000119309 495 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm11584-201ENSMUST00000120636 325 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm5699-201ENSMUST00000152491 723 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm23171-201ENSMUST00000157159 264 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm24997-201ENSMUST00000157910 105 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm23892-201ENSMUST00000158105 130 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm6374-201ENSMUST00000159051 788 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm27460-201ENSMUST00000184213 100 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm21673-201ENSMUST00000186640 436 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm5368-201ENSMUST00000189012 589 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm21135-201ENSMUST00000189023 436 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm42623-201ENSMUST00000197225 379 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm44016-201ENSMUST00000203463 164 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm6112-201ENSMUST00000208037 629 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm45002-201ENSMUST00000208045 120 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 AC154636.2-201ENSMUST00000222538 161 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm26128-201ENSMUST00000083170 110 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Trim42Q9D2H5 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Gm22266-201ENSMUST00000104011 138 ntBASIC5.09□□□□□ -1.59
Trim42Q9D2H5 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms