Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm24950-201ENSMUST00000082768 191 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm23971-201ENSMUST00000083317 191 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm23849-201ENSMUST00000083833 191 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm26316-201ENSMUST00000083886 191 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Vps28Q9D1C8 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Vps28Q9D1C8 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.84□□□□□ -1.8
Vps28Q9D1C8 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Vps28Q9D1C8 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm23577-201ENSMUST00000103950 110 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm26075-201ENSMUST00000104062 121 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm25833-201ENSMUST00000104137 133 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm11874-201ENSMUST00000117437 130 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm6923-201ENSMUST00000118343 406 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm15268-201ENSMUST00000118845 352 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm11943-201ENSMUST00000119473 327 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm6587-201ENSMUST00000120219 613 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm11260-201ENSMUST00000121163 942 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm26424-201ENSMUST00000122530 104 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm24505-201ENSMUST00000157682 126 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm24962-201ENSMUST00000157917 109 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm22840-201ENSMUST00000158444 136 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm3102-201ENSMUST00000164236 489 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm17054-201ENSMUST00000169811 259 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm27189-201ENSMUST00000184119 190 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm3454-201ENSMUST00000185571 412 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm37732-201ENSMUST00000194377 316 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm9722-201ENSMUST00000194568 802 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm17781-201ENSMUST00000195232 649 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm19243-201ENSMUST00000198592 269 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm45379-201ENSMUST00000211772 549 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm7753-201ENSMUST00000221007 867 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm24626-201ENSMUST00000082621 161 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm24921-201ENSMUST00000083024 107 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm24610-201ENSMUST00000083270 109 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.83□□□□□ -1.8
Vps28Q9D1C8 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Mir582-201ENSMUST00000103758 81 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm15783-201ENSMUST00000117521 633 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm11219-201ENSMUST00000118565 358 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm15312-201ENSMUST00000118827 271 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm6584-201ENSMUST00000119671 447 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm11829-201ENSMUST00000121003 282 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm15309-201ENSMUST00000121644 240 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm23084-201ENSMUST00000157850 114 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm8600-201ENSMUST00000186320 905 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm38075-201ENSMUST00000191979 920 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm37603-201ENSMUST00000192368 219 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm6680-201ENSMUST00000192789 950 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm42857-201ENSMUST00000200823 339 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm19244-201ENSMUST00000204340 253 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm5322-201ENSMUST00000206142 699 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm44611-201ENSMUST00000207507 355 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm25581-201ENSMUST00000083410 164 ntBASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vps28Q9D1C8 Gm16261-201ENSMUST00000096813 205 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms