Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm14890-201ENSMUST00000117660 676 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm12328-201ENSMUST00000118611 197 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm14159-201ENSMUST00000119832 451 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm13419-201ENSMUST00000121711 271 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm25665-201ENSMUST00000157695 110 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm20534-201ENSMUST00000172957 172 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm26195-201ENSMUST00000175035 101 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm22631-201ENSMUST00000179656 94 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Mir6410-201ENSMUST00000184204 104 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm8151-201ENSMUST00000184817 871 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm27564-201ENSMUST00000185196 96 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm37869-201ENSMUST00000193385 595 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm43814-201ENSMUST00000197851 413 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm7675-201ENSMUST00000208828 686 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm8942-201ENSMUST00000217892 400 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm35558-203ENSMUST00000222264 204 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx56Q9D0R4 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Mir92b-201ENSMUST00000102300 83 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm14868-201ENSMUST00000117840 216 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm14916-201ENSMUST00000121904 204 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm5958-201ENSMUST00000147698 297 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm25278-201ENSMUST00000157267 120 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm24224-201ENSMUST00000158828 258 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm22859-201ENSMUST00000174978 122 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm20612-201ENSMUST00000176318 236 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm29330-201ENSMUST00000190032 699 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm28414-201ENSMUST00000190111 294 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm28098-201ENSMUST00000191361 699 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm7041-201ENSMUST00000201227 524 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm44259-201ENSMUST00000204996 298 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm44871-201ENSMUST00000207821 497 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ddx56Q9D0R4 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm22194-201ENSMUST00000116869 95 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm14107-201ENSMUST00000117774 330 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm15603-201ENSMUST00000119252 492 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm12466-201ENSMUST00000121199 620 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm6568-201ENSMUST00000122274 697 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm24534-201ENSMUST00000157949 291 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm9236-201ENSMUST00000196892 587 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm44011-201ENSMUST00000203336 394 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm45105-201ENSMUST00000207824 397 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.5□□□□□ -1.69
Ddx56Q9D0R4 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms