Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm25902-201ENSMUST00000158493 318 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm17061-201ENSMUST00000163167 499 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Mir6385-201ENSMUST00000184295 105 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm28148-201ENSMUST00000186924 697 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm37523-201ENSMUST00000194901 412 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm43070-201ENSMUST00000196938 415 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm44294-201ENSMUST00000205090 728 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm44720-201ENSMUST00000206076 260 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm7786-201ENSMUST00000210494 436 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm39147-201ENSMUST00000211376 465 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm25630-201ENSMUST00000084000 162 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm10212-201ENSMUST00000087884 324 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm25420-201ENSMUST00000104216 127 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm12902-201ENSMUST00000118389 322 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm13692-201ENSMUST00000120774 371 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm24745-201ENSMUST00000157840 85 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm23775-201ENSMUST00000158991 249 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm24968-201ENSMUST00000179817 107 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm7299-201ENSMUST00000194441 581 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm5551-201ENSMUST00000199720 690 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm19177-201ENSMUST00000204520 613 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm45742-201ENSMUST00000212400 433 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm19219-201ENSMUST00000215863 724 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Gm22864-201ENSMUST00000083950 130 ntBASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc43Q9CR29 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm13603-201ENSMUST00000119404 83 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm22320-201ENSMUST00000157149 312 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm22277-201ENSMUST00000157204 277 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm23773-201ENSMUST00000158985 296 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm19498-201ENSMUST00000191128 331 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm37979-201ENSMUST00000193065 712 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm19243-201ENSMUST00000198592 269 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm7380-201ENSMUST00000211599 466 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm18892-201ENSMUST00000217628 881 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Mir421-201ENSMUST00000083575 76 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc43Q9CR29 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm13046-201ENSMUST00000117391 501 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm23671-201ENSMUST00000157472 103 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.72□□□□□ -1.81
Ccdc43Q9CR29 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms