Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm29573-201ENSMUST00000190291 919 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm29011-201ENSMUST00000191059 712 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm38076-201ENSMUST00000193889 450 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm18597-201ENSMUST00000209519 694 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.97□□□□□ -1.93
Use1Q9CQ56 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.97□□□□□ -1.93
Use1Q9CQ56 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm25004-201ENSMUST00000083811 161 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.97□□□□□ -1.93
Use1Q9CQ56 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Use1Q9CQ56 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
Use1Q9CQ56 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm9850-201ENSMUST00000117916 227 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm13076-201ENSMUST00000118041 204 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm11575-201ENSMUST00000122243 228 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm26254-201ENSMUST00000122491 118 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm23886-201ENSMUST00000122684 313 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm26100-201ENSMUST00000157245 127 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm22722-201ENSMUST00000157467 132 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm24720-201ENSMUST00000157518 166 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Mir1934-201ENSMUST00000158127 83 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm22833-201ENSMUST00000158292 132 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Mir5710-201ENSMUST00000176884 69 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm4854-201ENSMUST00000185902 574 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm23736-201ENSMUST00000082553 75 ntBASIC2.96□□□□□ -1.94
Use1Q9CQ56 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.96□□□□□ -1.94
Use1Q9CQ56 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm25728-201ENSMUST00000104525 159 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm14971-201ENSMUST00000117980 663 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm22789-201ENSMUST00000157884 130 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm29740-201ENSMUST00000193182 655 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm7786-201ENSMUST00000210494 436 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Use1Q9CQ56 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Gm10161-201ENSMUST00000091506 204 ntBASIC2.95□□□□□ -1.94
Use1Q9CQ56 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Use1Q9CQ56 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Use1Q9CQ56 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Use1Q9CQ56 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm24581-201ENSMUST00000103962 133 ntBASIC2.94□□□□□ -1.94
Use1Q9CQ56 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm8260-201ENSMUST00000119230 353 ntBASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm14656-201ENSMUST00000120342 502 ntBASIC2.94□□□□□ -1.94
Use1Q9CQ56 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm6762-201ENSMUST00000121769 289 ntBASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm26477-201ENSMUST00000122617 323 ntBASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.94□□□□□ -1.94
Use1Q9CQ56 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms