Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm24124-201ENSMUST00000104103 132 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm15670-201ENSMUST00000117740 447 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm11878-201ENSMUST00000117908 400 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm14669-201ENSMUST00000118841 250 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm12237-201ENSMUST00000120158 470 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm22479-201ENSMUST00000122566 81 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm23118-201ENSMUST00000122657 187 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm22819-201ENSMUST00000157445 303 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm26373-201ENSMUST00000157833 103 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm17109-201ENSMUST00000163985 358 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm26828-201ENSMUST00000180640 172 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm27580-201ENSMUST00000183666 149 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm28255-201ENSMUST00000187101 694 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm37431-201ENSMUST00000195102 111 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm42566-201ENSMUST00000197120 643 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm43541-201ENSMUST00000197208 581 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm43669-201ENSMUST00000198229 436 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm43026-201ENSMUST00000202972 325 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm18540-201ENSMUST00000204025 526 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim8Q99PJ2 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.46□□□□□ -1.69
Trim8Q99PJ2 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Trim8Q99PJ2 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm11219-201ENSMUST00000118565 358 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm14292-201ENSMUST00000118761 456 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm9308-201ENSMUST00000119073 448 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm13239-201ENSMUST00000119920 637 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm13356-201ENSMUST00000121678 335 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm12924-201ENSMUST00000121747 318 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm23463-201ENSMUST00000122468 99 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm22236-201ENSMUST00000157093 106 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm26153-201ENSMUST00000157433 127 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm22870-201ENSMUST00000157501 112 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm20701-201ENSMUST00000176082 347 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm26177-201ENSMUST00000178683 107 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm24306-201ENSMUST00000180229 79 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm28785-201ENSMUST00000187478 379 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm28151-201ENSMUST00000189404 951 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm28769-201ENSMUST00000190176 615 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm8041-201ENSMUST00000199755 616 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm46194-201ENSMUST00000218136 320 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm10038-201ENSMUST00000077233 441 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim8Q99PJ2 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim8Q99PJ2 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.45□□□□□ -1.7
Trim8Q99PJ2 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Gm25563-201ENSMUST00000104603 74 ntBASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Gm25316-201ENSMUST00000116826 118 ntBASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Gm14469-201ENSMUST00000118363 202 ntBASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.45□□□□□ -1.7
Trim8Q99PJ2 Gm25902-201ENSMUST00000158493 318 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms