Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm37837-201ENSMUST00000191743 604 ntBASIC2.35□□□□□ -2.03
Cdh23Q99PF4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.35□□□□□ -2.03
Cdh23Q99PF4 Gm45678-201ENSMUST00000210509 295 ntBASIC2.35□□□□□ -2.03
Cdh23Q99PF4 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC2.35□□□□□ -2.03
Cdh23Q99PF4 Gm23460-201ENSMUST00000083258 109 ntBASIC2.35□□□□□ -2.03
Cdh23Q99PF4 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Mir3968-201ENSMUST00000175355 100 ntBASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Gm3489-201ENSMUST00000190083 528 ntBASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Gm22806-201ENSMUST00000082738 136 ntBASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Cdh23Q99PF4 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.34□□□□□ -2.04
Cdh23Q99PF4 Gm15714-201ENSMUST00000117168 250 ntBASIC2.34□□□□□ -2.04
Cdh23Q99PF4 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.34□□□□□ -2.04
Cdh23Q99PF4 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC2.34□□□□□ -2.04
Cdh23Q99PF4 Gm44181-201ENSMUST00000203106 483 ntBASIC2.34□□□□□ -2.04
Cdh23Q99PF4 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.34□□□□□ -2.04
Cdh23Q99PF4 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Cdh23Q99PF4 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.34□□□□□ -2.04
Cdh23Q99PF4 Gm18359-201ENSMUST00000173024 1459 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm26080-201ENSMUST00000104069 131 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm14939-201ENSMUST00000120347 680 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm25807-201ENSMUST00000122783 305 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm21999-201ENSMUST00000165985 387 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm43676-201ENSMUST00000197532 540 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm26864-201ENSMUST00000181346 156 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm23264-201ENSMUST00000083372 107 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Mir6901-201ENSMUST00000185062 62 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.33□□□□□ -2.04
Cdh23Q99PF4 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdh23Q99PF4 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm23967-201ENSMUST00000175062 78 ntBASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm29356-201ENSMUST00000186935 373 ntBASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm23600-201ENSMUST00000157260 71 ntBASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm44343-201ENSMUST00000196702 90 ntBASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm43104-201ENSMUST00000197234 311 ntBASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm4263-202ENSMUST00000221392 667 ntBASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm7582-201ENSMUST00000160831 603 ntBASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdh23Q99PF4 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Gm12607-201ENSMUST00000120724 493 ntBASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Gm14768-201ENSMUST00000122126 678 ntBASIC2.31□□□□□ -2.04
Cdh23Q99PF4 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Mir7679-201ENSMUST00000183379 63 ntBASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Gm43406-201ENSMUST00000200356 334 ntBASIC2.31□□□□□ -2.04
Cdh23Q99PF4 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Gm14880-201ENSMUST00000117581 292 ntBASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.31□□□□□ -2.04
Cdh23Q99PF4 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Gm37162-201ENSMUST00000191708 551 ntBASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cdh23Q99PF4 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Gm11344-201ENSMUST00000122011 335 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Gm28118-201ENSMUST00000185957 294 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Gm28399-201ENSMUST00000186221 318 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Gm28572-201ENSMUST00000187444 318 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Gm29524-201ENSMUST00000190819 699 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Gm24736-201ENSMUST00000158862 130 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Cdh23Q99PF4 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms