Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Gm17132-201ENSMUST00000109542 1158 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm9785-202ENSMUST00000144563 593 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm24241-201ENSMUST00000157787 145 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm7346-201ENSMUST00000169661 476 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm4479-201ENSMUST00000178807 171 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm27249-201ENSMUST00000185049 328 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.3□□□□□ -1.72
Hdac9Q99N13 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hdac9Q99N13 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm19066-201ENSMUST00000193232 1078 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm43096-201ENSMUST00000196173 421 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm43217-201ENSMUST00000199513 367 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm7946-201ENSMUST00000203326 958 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm44727-201ENSMUST00000204225 451 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm9712-201ENSMUST00000210842 311 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.3□□□□□ -1.72
Hdac9Q99N13 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 CT030684.2-201ENSMUST00000228946 826 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Mir463-201ENSMUST00000093570 75 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.3□□□□□ -1.72
Hdac9Q99N13 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hdac9Q99N13 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Gm28637-201ENSMUST00000179424 345 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Gm21960-201ENSMUST00000181924 452 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Gm28148-201ENSMUST00000186924 697 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Gm21489-201ENSMUST00000189668 818 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Gm43407-201ENSMUST00000199816 317 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hdac9Q99N13 AC156795.1-201ENSMUST00000214655 414 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hdac9Q99N13 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.29□□□□□ -1.72
Hdac9Q99N13 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hdac9Q99N13 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm12902-201ENSMUST00000118389 322 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm14627-201ENSMUST00000118931 567 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm14898-201ENSMUST00000120202 645 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm22890-201ENSMUST00000158642 144 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm24976-201ENSMUST00000158972 135 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 AC137902.2-201ENSMUST00000227989 576 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm9765-201ENSMUST00000043170 321 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm22245-201ENSMUST00000082479 103 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Snord14e-201ENSMUST00000082857 90 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.28□□□□□ -1.72
Hdac9Q99N13 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms