Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm20534-201ENSMUST00000172957 172 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm19898-201ENSMUST00000177490 251 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm28146-201ENSMUST00000185517 701 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm7142-201ENSMUST00000194232 586 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm43541-201ENSMUST00000197208 581 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm43239-201ENSMUST00000200131 201 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm45312-201ENSMUST00000210566 311 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm19709-201ENSMUST00000215403 482 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm12582-201ENSMUST00000030555 697 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Cdk5rap3Q99LM2 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm14172-201ENSMUST00000118255 644 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm14669-201ENSMUST00000118841 250 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm14566-201ENSMUST00000118915 321 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm14578-201ENSMUST00000122166 391 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm23084-201ENSMUST00000157850 114 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm25902-201ENSMUST00000158493 318 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm27392-201ENSMUST00000185041 101 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm29288-201ENSMUST00000191582 901 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm37979-201ENSMUST00000193065 712 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm37523-201ENSMUST00000194901 412 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm43441-201ENSMUST00000201458 205 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm35931-201ENSMUST00000203931 448 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm45551-201ENSMUST00000211459 928 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm35558-202ENSMUST00000221819 499 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.53□□□□□ -1.84
Cdk5rap3Q99LM2 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm23691-201ENSMUST00000101878 107 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm23602-201ENSMUST00000157258 132 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm22501-201ENSMUST00000158981 127 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm23773-201ENSMUST00000158985 296 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Mir6899-201ENSMUST00000184798 64 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm38213-201ENSMUST00000193203 173 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm37428-201ENSMUST00000193886 137 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm42958-201ENSMUST00000197595 318 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm18429-201ENSMUST00000198707 421 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm43224-201ENSMUST00000201567 898 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm17911-201ENSMUST00000210806 877 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm7751-201ENSMUST00000212868 709 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm4036-201ENSMUST00000220842 626 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm9309-201ENSMUST00000223537 546 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 AC156574.2-201ENSMUST00000228023 282 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Gm4017-201ENSMUST00000084813 338 ntBASIC3.52□□□□□ -1.85
Cdk5rap3Q99LM2 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms