Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.34□□□□□ -1.88
Cstf1Q99LC2 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cstf1Q99LC2 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Cstf1Q99LC2 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm13504-201ENSMUST00000117490 316 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm13379-201ENSMUST00000118053 621 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm16458-201ENSMUST00000121428 502 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm16363-201ENSMUST00000132460 877 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm24190-201ENSMUST00000157976 216 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm23312-201ENSMUST00000158774 102 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm17063-201ENSMUST00000168135 456 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Snord92-201ENSMUST00000175548 85 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm5527-201ENSMUST00000179821 642 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm24969-201ENSMUST00000180331 79 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm34091-201ENSMUST00000200875 604 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm43415-201ENSMUST00000201934 750 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm45400-201ENSMUST00000211603 653 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 CT009764.1-201ENSMUST00000222260 483 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cstf1Q99LC2 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.33□□□□□ -1.88
Cstf1Q99LC2 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Mir294-201ENSMUST00000104710 84 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm2348-201ENSMUST00000108782 300 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm12739-201ENSMUST00000119769 382 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm24960-201ENSMUST00000157923 90 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm38018-201ENSMUST00000195651 540 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm44964-201ENSMUST00000207011 273 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.32□□□□□ -1.88
Cstf1Q99LC2 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cstf1Q99LC2 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm13122-201ENSMUST00000118380 453 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm14517-201ENSMUST00000119040 337 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm7071-201ENSMUST00000120458 462 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm12578-201ENSMUST00000121244 417 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm14581-201ENSMUST00000121726 198 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm23257-201ENSMUST00000158322 132 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm4207-201ENSMUST00000173144 960 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm19203-201ENSMUST00000174049 939 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Mir3965-201ENSMUST00000175570 69 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm20672-201ENSMUST00000176605 261 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm25120-201ENSMUST00000180148 79 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Mir6401-201ENSMUST00000184499 109 ntBASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cstf1Q99LC2 Gm20811-201ENSMUST00000190500 553 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms