Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm15206-201ENSMUST00000119143 454 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm14559-201ENSMUST00000121745 496 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm22724-201ENSMUST00000158091 127 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Scarna13-201ENSMUST00000158164 275 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm24731-201ENSMUST00000158227 131 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm24501-201ENSMUST00000158452 62 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm2389-201ENSMUST00000160487 189 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm22911-201ENSMUST00000177920 107 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Mir6346-201ENSMUST00000183982 81 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm37235-201ENSMUST00000195171 59 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm42643-201ENSMUST00000200504 279 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm5750-201ENSMUST00000218711 801 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm3086-202ENSMUST00000221248 310 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm37879-201ENSMUST00000193112 1995 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.2□□□□□ -1.58
Rpa1Q8VEE4 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm14086-201ENSMUST00000117152 173 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm11698-201ENSMUST00000117948 455 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm6274-201ENSMUST00000118173 797 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm13172-201ENSMUST00000118685 256 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm27926-201ENSMUST00000157180 66 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm24909-201ENSMUST00000157290 280 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm23759-201ENSMUST00000158351 268 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Snora15-201ENSMUST00000177461 131 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm27477-201ENSMUST00000184649 143 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm28640-201ENSMUST00000190918 550 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm37801-201ENSMUST00000194754 274 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm43501-201ENSMUST00000202513 107 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm44261-201ENSMUST00000203337 209 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm46223-201ENSMUST00000215196 675 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 mt-Ti-201ENSMUST00000082393 69 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm23972-201ENSMUST00000083322 165 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm23845-201ENSMUST00000083834 152 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Rpa1Q8VEE4 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm23746-201ENSMUST00000104229 125 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm22372-201ENSMUST00000104589 136 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm23988-201ENSMUST00000117034 122 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm11432-201ENSMUST00000117334 231 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm11718-201ENSMUST00000119942 537 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm22328-201ENSMUST00000158074 112 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm25907-201ENSMUST00000158486 125 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Gm17065-201ENSMUST00000165245 239 ntBASIC5.18□□□□□ -1.58
Rpa1Q8VEE4 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms