Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm24949-201ENSMUST00000183609 215 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm21673-201ENSMUST00000186640 436 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm21135-201ENSMUST00000189023 436 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm8599-201ENSMUST00000193033 457 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm44016-201ENSMUST00000203463 164 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm44054-201ENSMUST00000203814 372 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm44959-201ENSMUST00000209127 231 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm17989-201ENSMUST00000211543 412 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm45814-201ENSMUST00000212646 775 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm6988-201ENSMUST00000222676 375 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 AC239878.2-201ENSMUST00000224048 464 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Gm25929-201ENSMUST00000082784 107 ntBASIC4.28□□□□□ -1.72
Clrn1Q8K445 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Clrn1Q8K445 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm23193-201ENSMUST00000102427 82 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm12149-201ENSMUST00000117511 654 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm14761-201ENSMUST00000121363 262 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm24780-201ENSMUST00000157635 143 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm23411-201ENSMUST00000157988 62 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm29231-201ENSMUST00000179850 319 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm36934-201ENSMUST00000192007 306 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm37692-201ENSMUST00000192633 232 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm8874-201ENSMUST00000196826 286 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm17956-201ENSMUST00000199931 838 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm6462-201ENSMUST00000081488 304 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm25141-201ENSMUST00000083177 107 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.27□□□□□ -1.73
Clrn1Q8K445 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Clrn1Q8K445 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm22831-201ENSMUST00000102473 109 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Mir193b-201ENSMUST00000103784 79 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm23014-201ENSMUST00000104144 130 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm5757-201ENSMUST00000117494 528 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm12112-201ENSMUST00000117772 231 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm15206-201ENSMUST00000119143 454 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm15168-201ENSMUST00000121057 316 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm14980-201ENSMUST00000121247 736 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm22312-201ENSMUST00000158005 130 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm16114-201ENSMUST00000161930 300 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm6214-201ENSMUST00000178845 541 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm21726-201ENSMUST00000179654 392 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Gm25019-201ENSMUST00000179732 110 ntBASIC4.26□□□□□ -1.73
Clrn1Q8K445 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms