Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm26140-201ENSMUST00000103807 110 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm24788-201ENSMUST00000104283 156 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm12370-201ENSMUST00000117809 604 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm14292-201ENSMUST00000118761 456 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm14848-201ENSMUST00000121850 467 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.2□□□□□ -1.74
CopaQ8CIE6 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm22908-201ENSMUST00000177620 110 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm27695-201ENSMUST00000184301 91 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm43026-201ENSMUST00000202972 325 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm18703-201ENSMUST00000215318 333 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm26449-201ENSMUST00000082452 104 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CopaQ8CIE6 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CopaQ8CIE6 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm24067-201ENSMUST00000104514 85 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm12252-201ENSMUST00000119517 219 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm11398-201ENSMUST00000120330 320 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm22986-201ENSMUST00000122753 130 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm25908-201ENSMUST00000157624 98 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm24745-201ENSMUST00000157840 85 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm22166-201ENSMUST00000178419 121 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm23288-201ENSMUST00000179213 121 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Mir6541-201ENSMUST00000183649 110 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm27899-201ENSMUST00000184715 64 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm36984-201ENSMUST00000192770 235 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm42622-201ENSMUST00000197229 355 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm34091-201ENSMUST00000200875 604 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm44720-201ENSMUST00000206076 260 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm45173-201ENSMUST00000206819 305 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm18116-201ENSMUST00000220920 537 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 AC154245.1-201ENSMUST00000224615 601 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.19□□□□□ -1.74
CopaQ8CIE6 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CopaQ8CIE6 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm11432-201ENSMUST00000117334 231 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm13239-201ENSMUST00000119920 637 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm14240-201ENSMUST00000120353 546 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm6568-201ENSMUST00000122274 697 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm25559-201ENSMUST00000157182 74 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm23228-201ENSMUST00000157296 270 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm22816-201ENSMUST00000157450 117 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm26348-201ENSMUST00000157528 240 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm23152-201ENSMUST00000175322 116 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm21960-201ENSMUST00000181924 452 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm27539-201ENSMUST00000184971 224 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm28594-201ENSMUST00000187022 661 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm28785-201ENSMUST00000187478 379 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm28414-201ENSMUST00000190111 294 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm44923-201ENSMUST00000206673 85 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 Gm18160-201ENSMUST00000214279 827 ntBASIC4.18□□□□□ -1.74
CopaQ8CIE6 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.18□□□□□ -1.74
CopaQ8CIE6 AC126673.2-201ENSMUST00000221052 686 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms