Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm7071-201ENSMUST00000120458 462 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm22561-201ENSMUST00000157331 84 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm26991-201ENSMUST00000180950 620 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm28847-201ENSMUST00000186778 700 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm29365-201ENSMUST00000189461 699 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm28552-201ENSMUST00000190725 388 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm30341-201ENSMUST00000194363 289 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm44060-201ENSMUST00000204440 410 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm45189-201ENSMUST00000208567 363 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ccdc28aQ8CEI3 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm25500-201ENSMUST00000104426 123 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm15282-201ENSMUST00000117707 300 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm12495-201ENSMUST00000119750 447 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm12213-201ENSMUST00000119924 353 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm14506-201ENSMUST00000121165 536 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm14623-201ENSMUST00000121398 603 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm6900-201ENSMUST00000178971 342 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm29597-201ENSMUST00000188035 308 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm43214-201ENSMUST00000199242 352 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm6615-201ENSMUST00000199426 631 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc28aQ8CEI3 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm14008-201ENSMUST00000120483 274 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm8988-201ENSMUST00000155015 1240 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm2092-201ENSMUST00000178887 639 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm2759-201ENSMUST00000179938 639 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm5551-201ENSMUST00000199720 690 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Gm44718-201ENSMUST00000206886 359 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ccdc28aQ8CEI3 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm15120-201ENSMUST00000120602 301 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm11582-201ENSMUST00000121041 236 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm22322-201ENSMUST00000157151 111 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm24436-201ENSMUST00000157889 302 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm24879-201ENSMUST00000158386 143 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm17166-201ENSMUST00000172006 431 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm20718-201ENSMUST00000176058 259 ntBASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.78□□□□□ -1.96
Ccdc28aQ8CEI3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms