Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Ccdc87Q8CDL9 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
Ccdc87Q8CDL9 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.46□□□□□ -1.69
Ccdc87Q8CDL9 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.46□□□□□ -1.69
Ccdc87Q8CDL9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm25726-201ENSMUST00000104529 129 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm11813-201ENSMUST00000118586 291 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm14159-201ENSMUST00000119832 451 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm15037-201ENSMUST00000120358 259 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm14649-201ENSMUST00000121814 324 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm8200-201ENSMUST00000122390 222 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm25037-201ENSMUST00000175418 110 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm22395-201ENSMUST00000177427 96 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm27660-201ENSMUST00000184028 208 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm34091-201ENSMUST00000200875 604 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm17906-201ENSMUST00000202480 901 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm44818-201ENSMUST00000206608 358 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 AC160962.2-201ENSMUST00000224761 632 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.46□□□□□ -1.7
Ccdc87Q8CDL9 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm23577-201ENSMUST00000103950 110 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm12427-201ENSMUST00000117719 302 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm12137-201ENSMUST00000119565 346 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm7308-201ENSMUST00000121087 447 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm6565-201ENSMUST00000121217 438 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm25264-201ENSMUST00000158519 117 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm17538-201ENSMUST00000168236 327 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm25748-201ENSMUST00000175487 70 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm27883-201ENSMUST00000183941 102 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm27414-201ENSMUST00000185033 381 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm37757-201ENSMUST00000193072 210 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm44376-201ENSMUST00000197570 128 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm19243-201ENSMUST00000198592 269 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm9616-201ENSMUST00000221154 781 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm6361-201ENSMUST00000091031 435 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.45□□□□□ -1.7
Ccdc87Q8CDL9 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm13614-201ENSMUST00000117306 503 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm13550-201ENSMUST00000118185 525 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm12900-201ENSMUST00000120919 573 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm5963-201ENSMUST00000143451 236 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm22059-201ENSMUST00000157544 104 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Mir7658-201ENSMUST00000184043 57 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm29228-201ENSMUST00000185489 418 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm28471-201ENSMUST00000185994 615 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm28598-201ENSMUST00000186490 615 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm5116-201ENSMUST00000187732 463 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm29627-201ENSMUST00000187984 463 ntBASIC4.44□□□□□ -1.7
Ccdc87Q8CDL9 Gm29268-201ENSMUST00000188669 615 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms