Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SynpoQ8CC35 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
SynpoQ8CC35 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
SynpoQ8CC35 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SynpoQ8CC35 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SynpoQ8CC35 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm25726-201ENSMUST00000104529 129 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm14469-201ENSMUST00000118363 202 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm13804-201ENSMUST00000119552 172 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm12884-201ENSMUST00000120371 325 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm25456-201ENSMUST00000157952 109 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm16134-201ENSMUST00000161714 336 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm22108-201ENSMUST00000177961 106 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm24798-201ENSMUST00000179334 106 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm26960-201ENSMUST00000182263 412 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm27660-201ENSMUST00000184028 208 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm4557-201ENSMUST00000185826 907 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm4526-201ENSMUST00000186039 920 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm28623-201ENSMUST00000187219 192 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm29045-201ENSMUST00000187278 698 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm8708-201ENSMUST00000188500 906 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm42475-201ENSMUST00000201212 295 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm44523-201ENSMUST00000205616 417 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm18258-201ENSMUST00000210413 542 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm29774-201ENSMUST00000219270 436 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 AC116589.3-202ENSMUST00000221770 649 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 AC116589.6-201ENSMUST00000222252 649 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Mecom-201ENSMUST00000061088 348 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Snord38a-201ENSMUST00000083746 71 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.35□□□□□ -1.71
SynpoQ8CC35 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SynpoQ8CC35 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SynpoQ8CC35 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm13082-201ENSMUST00000118877 561 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm14307-201ENSMUST00000118930 291 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm14861-201ENSMUST00000119451 455 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm7071-201ENSMUST00000120458 462 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm14915-201ENSMUST00000120747 204 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm11254-201ENSMUST00000122368 653 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm15899-201ENSMUST00000128586 238 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm14297-201ENSMUST00000129110 291 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm26347-201ENSMUST00000157526 131 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm23782-201ENSMUST00000157939 120 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm5258-201ENSMUST00000165437 327 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm16378-201ENSMUST00000179168 342 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm27599-201ENSMUST00000183758 174 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm3145-201ENSMUST00000188584 220 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm37732-201ENSMUST00000194377 316 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm45857-201ENSMUST00000212207 356 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm9818-201ENSMUST00000050900 255 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm26111-201ENSMUST00000083969 106 ntBASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SynpoQ8CC35 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SynpoQ8CC35 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SynpoQ8CC35 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SynpoQ8CC35 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SynpoQ8CC35 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SynpoQ8CC35 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SynpoQ8CC35 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SynpoQ8CC35 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.33□□□□□ -1.72
SynpoQ8CC35 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.33□□□□□ -1.72
SynpoQ8CC35 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SynpoQ8CC35 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SynpoQ8CC35 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms