Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25839-201ENSMUST00000158921 103 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm17075-201ENSMUST00000171924 670 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm19418-201ENSMUST00000197436 580 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trub1Q8C0D0 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm14939-201ENSMUST00000120347 680 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm13443-201ENSMUST00000120770 555 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm11456-201ENSMUST00000121070 256 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm3370-201ENSMUST00000171785 500 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Mir6405-201ENSMUST00000184584 124 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm29597-201ENSMUST00000188035 308 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm37616-201ENSMUST00000193974 322 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm5176-202ENSMUST00000220267 583 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.76□□□□□ -1.97
Trub1Q8C0D0 Gm24142-201ENSMUST00000101960 107 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm11905-201ENSMUST00000117653 678 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm5392-201ENSMUST00000122189 789 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm19203-201ENSMUST00000174049 939 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm25528-201ENSMUST00000180264 132 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm37219-201ENSMUST00000192036 926 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm34314-201ENSMUST00000203622 367 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm44266-201ENSMUST00000205235 500 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm45105-201ENSMUST00000207824 397 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm45189-201ENSMUST00000208567 363 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm8074-201ENSMUST00000095071 252 ntBASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trub1Q8C0D0 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm11843-201ENSMUST00000118984 425 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm12042-201ENSMUST00000120479 301 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm24291-201ENSMUST00000157633 162 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm18043-201ENSMUST00000216741 739 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm4263-202ENSMUST00000221392 667 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm6215-201ENSMUST00000119297 1386 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trub1Q8C0D0 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm24715-201ENSMUST00000102377 95 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm23128-201ENSMUST00000104257 132 ntBASIC2.73□□□□□ -1.97
Trub1Q8C0D0 Gm24982-201ENSMUST00000104456 132 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms