Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gm8209-201ENSMUST00000206386 553 ntBASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Gm9712-201ENSMUST00000210842 311 ntBASIC3.29□□□□□ -1.88
Trim23Q8BGX0 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.29□□□□□ -1.88
Trim23Q8BGX0 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.29□□□□□ -1.88
Trim23Q8BGX0 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.29□□□□□ -1.88
Trim23Q8BGX0 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.29□□□□□ -1.88
Trim23Q8BGX0 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.29□□□□□ -1.88
Trim23Q8BGX0 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim23Q8BGX0 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm14931-201ENSMUST00000111079 253 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm14681-201ENSMUST00000118047 411 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm9119-201ENSMUST00000118866 495 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm14739-201ENSMUST00000120424 802 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm11252-201ENSMUST00000120572 939 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm12693-201ENSMUST00000121965 483 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm14564-201ENSMUST00000122159 294 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm24553-201ENSMUST00000158653 131 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm22910-201ENSMUST00000178568 132 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm26933-201ENSMUST00000182320 827 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Mir6413-201ENSMUST00000184049 108 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm43493-201ENSMUST00000199837 202 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm43227-201ENSMUST00000202239 677 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm44076-201ENSMUST00000203072 520 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm44927-201ENSMUST00000207573 716 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm9309-201ENSMUST00000223537 546 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Mir350-201ENSMUST00000083639 99 ntBASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim23Q8BGX0 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm13692-201ENSMUST00000120774 371 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm22960-201ENSMUST00000122517 104 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm25295-201ENSMUST00000122794 306 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm22561-201ENSMUST00000157331 84 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm23326-201ENSMUST00000157419 105 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm24819-201ENSMUST00000175094 166 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm28785-201ENSMUST00000187478 379 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm28069-201ENSMUST00000189926 214 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm37989-201ENSMUST00000195202 803 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm43954-201ENSMUST00000204634 544 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm44615-201ENSMUST00000206548 358 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm5265-201ENSMUST00000076828 342 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.27□□□□□ -1.89
Trim23Q8BGX0 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim23Q8BGX0 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Gm14880-201ENSMUST00000117581 292 ntBASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Gm13167-201ENSMUST00000118554 578 ntBASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Gm15103-201ENSMUST00000119893 871 ntBASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Gm14898-201ENSMUST00000120202 645 ntBASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Gm15142-201ENSMUST00000121013 856 ntBASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim23Q8BGX0 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms