Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm23274-201ENSMUST00000104056 130 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm14657-201ENSMUST00000117461 302 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm16106-201ENSMUST00000119187 294 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm8880-201ENSMUST00000121800 454 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm15075-201ENSMUST00000122187 477 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm25293-201ENSMUST00000122792 285 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm24534-201ENSMUST00000157949 291 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm25335-201ENSMUST00000158043 103 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm24546-201ENSMUST00000158652 102 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm22136-201ENSMUST00000158751 268 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm10319-202ENSMUST00000159439 846 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm17919-201ENSMUST00000173344 312 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Mir6973b-201ENSMUST00000184185 80 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm19777-201ENSMUST00000191940 358 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm37455-201ENSMUST00000191993 529 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm18924-201ENSMUST00000211929 316 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm46193-201ENSMUST00000219399 364 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm24166-201ENSMUST00000082724 135 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Mir133b-201ENSMUST00000083546 119 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Synpr-207ENSMUST00000223583 3362 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf220Q6PDX6 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm22472-201ENSMUST00000104115 134 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm23322-201ENSMUST00000104464 167 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Mir294-201ENSMUST00000104710 84 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm14995-201ENSMUST00000117135 391 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm14670-201ENSMUST00000117327 337 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm12982-201ENSMUST00000117408 190 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm7363-201ENSMUST00000119883 399 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm12515-201ENSMUST00000120116 361 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm14638-201ENSMUST00000121338 216 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm15381-201ENSMUST00000121501 1156 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm23887-201ENSMUST00000122683 172 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm25621-201ENSMUST00000157223 114 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm23016-201ENSMUST00000158431 62 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm23415-201ENSMUST00000175519 83 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm43408-201ENSMUST00000198263 440 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm7751-201ENSMUST00000212868 709 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm8158-201ENSMUST00000219220 465 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm8112-201ENSMUST00000219637 465 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.28□□□□□ -1.72
Rnf220Q6PDX6 Gm26056-201ENSMUST00000083043 104 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms