Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC2□□□□□ -2.09
Col7a1Q63870 Gm24478-201ENSMUST00000157439 158 ntBASIC2□□□□□ -2.09
Col7a1Q63870 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC2□□□□□ -2.09
Col7a1Q63870 Mir6394-201ENSMUST00000184738 99 ntBASIC2□□□□□ -2.09
Col7a1Q63870 AC155715.1-201ENSMUST00000213575 463 ntBASIC2□□□□□ -2.09
Col7a1Q63870 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Gm44220-201ENSMUST00000203784 2487 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Col7a1Q63870 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Col7a1Q63870 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Col7a1Q63870 AC154552.6-201ENSMUST00000221365 1342 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Gm28118-201ENSMUST00000185957 294 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Mir6352-201ENSMUST00000184495 116 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 AC153975.1-201ENSMUST00000220087 926 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 CT030662.1-201ENSMUST00000227380 232 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col7a1Q63870 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Gm25755-201ENSMUST00000083396 107 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Mir222-201ENSMUST00000083537 79 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC1.99□□□□□ -2.09
Col7a1Q63870 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col7a1Q63870 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col7a1Q63870 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm28399-201ENSMUST00000186221 318 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm28572-201ENSMUST00000187444 318 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm29524-201ENSMUST00000190819 699 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm4263-202ENSMUST00000221392 667 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Col7a1Q63870 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col7a1Q63870 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col7a1Q63870 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm22988-201ENSMUST00000122759 144 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm38081-201ENSMUST00000192680 1645 ntBASIC1.98□□□□□ -2.09
Col7a1Q63870 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col7a1Q63870 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm27668-201ENSMUST00000184188 120 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm45031-201ENSMUST00000206800 288 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Col7a1Q63870 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC1.97□□□□□ -2.09
Col7a1Q63870 AC152946.2-201ENSMUST00000219071 337 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 AC107663.3-201ENSMUST00000225873 601 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 CT009510.2-203ENSMUST00000226704 2136 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Vaultrc5-201ENSMUST00000083211 143 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm45483-201ENSMUST00000209845 1682 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm24273-201ENSMUST00000102332 164 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm12803-201ENSMUST00000118907 821 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm12739-201ENSMUST00000119769 382 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Col7a1Q63870 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 AC126253.2-201ENSMUST00000226518 205 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm37788-201ENSMUST00000193958 2705 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm6207-201ENSMUST00000120075 1386 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm6228-201ENSMUST00000178856 1386 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm7675-201ENSMUST00000208828 686 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm5670-201ENSMUST00000093546 372 ntBASIC1.97□□□□□ -2.09
Col7a1Q63870 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Col7a1Q63870 Gm37911-201ENSMUST00000193099 1545 ntBASIC1.96□□□□□ -2.09
Col7a1Q63870 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Col7a1Q63870 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC1.96□□□□□ -2.1
Col7a1Q63870 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms