Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm13419-201ENSMUST00000121711 271 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim27Q62158 Gm25835-201ENSMUST00000158917 144 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Gm6395-201ENSMUST00000167639 691 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim27Q62158 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.09□□□□□ -1.75
Trim27Q62158 Mir6413-201ENSMUST00000184049 108 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Gm28255-201ENSMUST00000187101 694 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Gm42828-201ENSMUST00000199669 469 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Gm44727-201ENSMUST00000204225 451 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim27Q62158 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Trim27Q62158 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim27Q62158 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.09□□□□□ -1.75
Trim27Q62158 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim27Q62158 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Trim27Q62158 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Trim27Q62158 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim27Q62158 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim27Q62158 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Gm22561-201ENSMUST00000157331 84 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Gm2855-201ENSMUST00000166765 456 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim27Q62158 Gm28594-201ENSMUST00000187022 661 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim27Q62158 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim27Q62158 Npn2-202ENSMUST00000189275 235 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Gm29288-201ENSMUST00000191582 901 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim27Q62158 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim27Q62158 Gm44274-201ENSMUST00000203417 256 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim27Q62158 AC127302.1-201ENSMUST00000215973 1111 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Gm18729-201ENSMUST00000217230 621 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim27Q62158 Gm9309-201ENSMUST00000223537 546 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim27Q62158 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim27Q62158 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Gm8074-201ENSMUST00000095071 252 ntBASIC4.08□□□□□ -1.76
Trim27Q62158 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim27Q62158 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim27Q62158 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim27Q62158 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim27Q62158 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim27Q62158 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Trim27Q62158 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim27Q62158 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Trim27Q62158 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim27Q62158 Gm25764-201ENSMUST00000104092 134 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.07□□□□□ -1.76
Trim27Q62158 Gm6664-201ENSMUST00000119138 468 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Gm12137-201ENSMUST00000119565 346 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Gm15452-201ENSMUST00000119877 240 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.07□□□□□ -1.76
Trim27Q62158 Gm22722-201ENSMUST00000157467 132 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Gm22833-201ENSMUST00000158292 132 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim27Q62158 Mir3112-201ENSMUST00000175431 82 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Gm27580-201ENSMUST00000183666 149 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim27Q62158 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim27Q62158 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim27Q62158 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.07□□□□□ -1.76
Trim27Q62158 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim27Q62158 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim27Q62158 Gm7648-201ENSMUST00000173036 1658 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim27Q62158 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim27Q62158 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim27Q62158 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Trim27Q62158 Gm13761-201ENSMUST00000117238 807 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 Gm13511-201ENSMUST00000121167 363 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim27Q62158 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim27Q62158 Gm37438-201ENSMUST00000192813 393 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim27Q62158 Gm43039-201ENSMUST00000202883 963 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim27Q62158 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim27Q62158 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim27Q62158 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim27Q62158 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 AC154594.1-201ENSMUST00000225171 1273 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.06□□□□□ -1.76
Trim27Q62158 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
Trim27Q62158 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim27Q62158 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim27Q62158 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim27Q62158 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms