Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ift88Q61371 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ift88Q61371 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ift88Q61371 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Ift88Q61371 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ift88Q61371 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm24951-201ENSMUST00000102182 109 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm23697-201ENSMUST00000103897 110 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ift88Q61371 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm13239-201ENSMUST00000119920 637 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm14129-201ENSMUST00000122436 291 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm23463-201ENSMUST00000122468 99 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm26348-201ENSMUST00000157528 240 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm25606-201ENSMUST00000158363 95 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm20701-201ENSMUST00000176082 347 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm27313-201ENSMUST00000183500 142 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm28404-201ENSMUST00000190242 453 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm45232-201ENSMUST00000207811 162 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm44887-201ENSMUST00000208980 178 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 AL603630.1-201ENSMUST00000214781 147 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 AC173482.2-201ENSMUST00000224044 750 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm23518-201ENSMUST00000082835 153 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm26121-201ENSMUST00000083364 162 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm22350-201ENSMUST00000083924 156 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ift88Q61371 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ift88Q61371 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ift88Q61371 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.28□□□□□ -1.72
Ift88Q61371 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.28□□□□□ -1.73
Ift88Q61371 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ift88Q61371 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ift88Q61371 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ift88Q61371 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ift88Q61371 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm14362-201ENSMUST00000121679 273 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm23206-201ENSMUST00000122720 184 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm15254-201ENSMUST00000149567 273 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm24976-201ENSMUST00000158972 135 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm22716-201ENSMUST00000177596 107 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm24968-201ENSMUST00000179817 107 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm27161-201ENSMUST00000183960 562 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm28847-201ENSMUST00000186778 700 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm17946-201ENSMUST00000186856 538 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm29365-201ENSMUST00000189461 699 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Trbv11-201ENSMUST00000194354 260 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ift88Q61371 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm20039-201ENSMUST00000210329 394 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm19441-201ENSMUST00000221545 330 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.27□□□□□ -1.73
Ift88Q61371 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ift88Q61371 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ift88Q61371 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ift88Q61371 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ift88Q61371 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ift88Q61371 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ift88Q61371 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.27□□□□□ -1.73
Ift88Q61371 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ift88Q61371 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ift88Q61371 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms