Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm43601-201ENSMUST00000196294 945 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm42526-201ENSMUST00000198956 393 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm44099-201ENSMUST00000203299 112 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm8820-201ENSMUST00000204077 571 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.15□□□□□ -1.75
CtcfQ61164 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.15□□□□□ -1.75
CtcfQ61164 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CtcfQ61164 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 AC115735.3-201ENSMUST00000227757 513 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CtcfQ61164 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CtcfQ61164 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm23516-201ENSMUST00000093728 107 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CtcfQ61164 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CtcfQ61164 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CtcfQ61164 Mir551b-201ENSMUST00000102165 98 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm24273-201ENSMUST00000102332 164 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm25765-201ENSMUST00000104100 132 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm23178-201ENSMUST00000116782 95 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm14794-201ENSMUST00000118181 192 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm12252-201ENSMUST00000119517 219 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm15799-201ENSMUST00000120899 289 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Mup-ps22-201ENSMUST00000121611 243 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.14□□□□□ -1.75
CtcfQ61164 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC4.14□□□□□ -1.75
CtcfQ61164 Gm23554-201ENSMUST00000157818 110 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm22889-201ENSMUST00000158639 58 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm26159-201ENSMUST00000158968 104 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm3111-201ENSMUST00000167426 490 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Mir1251-201ENSMUST00000175486 84 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm6900-201ENSMUST00000178971 342 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm8676-201ENSMUST00000184206 637 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CtcfQ61164 Gm18448-201ENSMUST00000186286 599 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
CtcfQ61164 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
CtcfQ61164 Gm20832-201ENSMUST00000189076 665 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CtcfQ61164 Gm5829-201ENSMUST00000191383 351 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm38270-201ENSMUST00000192721 407 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm30638-201ENSMUST00000195570 656 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm36728-201ENSMUST00000195782 665 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm43604-201ENSMUST00000199799 705 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.14□□□□□ -1.75
CtcfQ61164 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.14□□□□□ -1.75
CtcfQ61164 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.14□□□□□ -1.75
CtcfQ61164 Gm8125-201ENSMUST00000216602 738 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CtcfQ61164 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC4.14□□□□□ -1.75
CtcfQ61164 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CtcfQ61164 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CtcfQ61164 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CtcfQ61164 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CtcfQ61164 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm22758-201ENSMUST00000102275 96 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm22072-201ENSMUST00000116850 121 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm15443-201ENSMUST00000118947 820 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm13155-201ENSMUST00000119277 646 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm6797-201ENSMUST00000119440 512 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm13170-201ENSMUST00000119716 643 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm13574-201ENSMUST00000120482 394 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm11252-201ENSMUST00000120572 939 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm14506-201ENSMUST00000121165 536 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm8178-201ENSMUST00000121570 646 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm26271-201ENSMUST00000158349 104 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm22108-201ENSMUST00000177961 106 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Gm24798-201ENSMUST00000179334 106 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm21758-201ENSMUST00000179336 819 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm10067-201ENSMUST00000179462 348 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcfQ61164 Mir8118-201ENSMUST00000183962 129 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm28661-201ENSMUST00000188231 681 ntBASIC4.13□□□□□ -1.75
CtcfQ61164 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms