Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm43746-201ENSMUST00000200028 317 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm44727-201ENSMUST00000204225 451 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm45288-201ENSMUST00000210236 151 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm46194-201ENSMUST00000218136 320 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 AC115289.1-201ENSMUST00000224915 522 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 AC140210.1-201ENSMUST00000224961 534 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 AC124729.1-201ENSMUST00000225327 976 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 AC154515.2-201ENSMUST00000226093 406 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm23178-201ENSMUST00000116782 95 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm14975-201ENSMUST00000118741 664 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm22225-201ENSMUST00000157358 278 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm23325-201ENSMUST00000157422 129 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm23250-201ENSMUST00000157444 267 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm22390-201ENSMUST00000157588 325 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm20534-201ENSMUST00000172957 172 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Mir713-201ENSMUST00000178651 108 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm3489-201ENSMUST00000190083 528 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm19193-201ENSMUST00000190263 590 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm37219-201ENSMUST00000192036 926 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm38311-201ENSMUST00000192945 165 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 CT030242.2-201ENSMUST00000221588 148 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 AC107663.3-201ENSMUST00000225873 601 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Trav3-1Q5R1I8 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
Trav3-1Q5R1I8 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm22758-201ENSMUST00000102275 96 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm13136-201ENSMUST00000121031 2950 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm22957-201ENSMUST00000122511 123 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm23326-201ENSMUST00000157419 105 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm22722-201ENSMUST00000157467 132 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm27592-201ENSMUST00000157729 126 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm25386-201ENSMUST00000157814 288 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm22833-201ENSMUST00000158292 132 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm22174-201ENSMUST00000175050 125 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm22692-201ENSMUST00000175055 125 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm27634-201ENSMUST00000175060 126 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm22460-201ENSMUST00000175269 124 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm25535-201ENSMUST00000175364 125 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm25534-201ENSMUST00000175365 125 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm24365-201ENSMUST00000175384 125 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm44310-201ENSMUST00000175424 126 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm22639-201ENSMUST00000175591 125 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm24979-201ENSMUST00000178626 126 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Mir7011-201ENSMUST00000183768 73 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm27743-201ENSMUST00000185136 126 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm37617-201ENSMUST00000194309 159 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm44688-201ENSMUST00000209083 537 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm45791-201ENSMUST00000212908 352 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 AC132104.1-201ENSMUST00000213615 260 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 AC160114.2-201ENSMUST00000223021 300 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm25402-201ENSMUST00000082966 131 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm10704-201ENSMUST00000098952 730 ntBASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Trav3-1Q5R1I8 Gm24935-201ENSMUST00000103770 110 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm14681-201ENSMUST00000118047 411 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm14240-201ENSMUST00000120353 546 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.7□□□□□ -2.14
Trav3-1Q5R1I8 Gm24770-201ENSMUST00000158505 92 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 136.5 ms