Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm43104-201ENSMUST00000197234 311 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm45192-201ENSMUST00000206749 283 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm7588-201ENSMUST00000216866 571 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 AC164883.9-201ENSMUST00000228042 399 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.43□□□□□ -2.02
Trav5d-4Q5R1F6 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm14973-201ENSMUST00000117248 255 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm9850-201ENSMUST00000117916 227 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm11708-201ENSMUST00000119530 832 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm11693-201ENSMUST00000119625 565 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm22322-201ENSMUST00000157151 111 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm5967-201ENSMUST00000172723 494 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm23053-201ENSMUST00000175136 96 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm27698-201ENSMUST00000184060 249 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm43478-201ENSMUST00000200381 292 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm9370-201ENSMUST00000222787 609 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm23447-201ENSMUST00000082798 163 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Gm22970-201ENSMUST00000083304 186 ntBASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm24951-201ENSMUST00000102182 109 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm12268-201ENSMUST00000118398 442 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm11582-201ENSMUST00000121041 236 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm22730-201ENSMUST00000158085 171 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Snord93-201ENSMUST00000175580 71 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm24520-201ENSMUST00000179510 110 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm6113-201ENSMUST00000180319 639 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm27921-201ENSMUST00000183968 108 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm28923-201ENSMUST00000187755 322 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm37104-201ENSMUST00000193278 196 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm19253-201ENSMUST00000204279 307 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm44223-201ENSMUST00000204854 114 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm44208-201ENSMUST00000205199 421 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.41□□□□□ -2.02
Trav5d-4Q5R1F6 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Trav5d-4Q5R1F6 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
Trav5d-4Q5R1F6 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Trav5d-4Q5R1F6 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm24127-201ENSMUST00000104110 130 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm22023-201ENSMUST00000104354 130 ntBASIC2.4□□□□□ -2.03
Trav5d-4Q5R1F6 Gm14981-201ENSMUST00000117325 943 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms