Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 Smc5-206ENSMUST00000226111 3265 ntBASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Rnf43Q5NCP0 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm12423-201ENSMUST00000118334 135 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm13518-201ENSMUST00000120018 233 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm13345-201ENSMUST00000121928 228 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm23169-201ENSMUST00000157157 112 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm22037-201ENSMUST00000157280 296 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm25425-201ENSMUST00000157611 96 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm24546-201ENSMUST00000158652 102 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm3191-201ENSMUST00000167139 346 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm20526-201ENSMUST00000173416 158 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm24464-201ENSMUST00000179697 107 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Mir6933-201ENSMUST00000184982 81 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm37881-201ENSMUST00000193001 421 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm44820-201ENSMUST00000207420 396 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm45651-201ENSMUST00000210857 335 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Snora23-201ENSMUST00000082517 184 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm23412-201ENSMUST00000083017 107 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Rnf43Q5NCP0 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm23193-201ENSMUST00000102427 82 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm23594-201ENSMUST00000104307 134 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm15147-201ENSMUST00000122263 483 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm24689-201ENSMUST00000157760 104 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Mir3104-201ENSMUST00000174911 63 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm25361-201ENSMUST00000179358 76 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm27611-201ENSMUST00000184690 108 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm27490-201ENSMUST00000184754 128 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm28552-201ENSMUST00000190725 388 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm37836-201ENSMUST00000195875 175 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm44720-201ENSMUST00000206076 260 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm18442-201ENSMUST00000220925 639 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm25134-201ENSMUST00000082646 160 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm23731-201ENSMUST00000083749 107 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf43Q5NCP0 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms