Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm22036-201ENSMUST00000157279 215 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm24666-201ENSMUST00000158937 167 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm38213-201ENSMUST00000193203 173 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm7299-201ENSMUST00000194441 581 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm33973-201ENSMUST00000195148 534 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm5317-201ENSMUST00000204445 847 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm44118-201ENSMUST00000204665 229 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm36247-201ENSMUST00000211834 285 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 AC102352.1-201ENSMUST00000224187 582 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.73□□□□□ -1.81
Trim58Q5NCC9 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm24096-201ENSMUST00000103905 110 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm14879-201ENSMUST00000117308 507 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm7846-201ENSMUST00000145844 274 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm23325-201ENSMUST00000157422 129 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm25557-201ENSMUST00000158084 315 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Mir6238-201ENSMUST00000184140 129 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm7870-201ENSMUST00000184467 616 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm29460-201ENSMUST00000188607 714 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm37007-201ENSMUST00000194234 319 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm43384-201ENSMUST00000200569 637 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm44594-201ENSMUST00000208982 407 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm19709-201ENSMUST00000215403 482 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm32300-201ENSMUST00000221735 515 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Trim58Q5NCC9 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.72□□□□□ -1.81
Trim58Q5NCC9 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm13803-201ENSMUST00000117547 489 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm14939-201ENSMUST00000120347 680 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm14881-201ENSMUST00000120366 372 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm22985-201ENSMUST00000122754 116 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm29105-201ENSMUST00000187256 450 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm6064-201ENSMUST00000203999 454 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm19232-201ENSMUST00000211621 652 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm8274-201ENSMUST00000219820 463 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm4263-202ENSMUST00000221392 667 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Snora23-201ENSMUST00000082517 184 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim58Q5NCC9 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Gm14448-201ENSMUST00000116383 210 ntBASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Gm14771-201ENSMUST00000118249 203 ntBASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Gm14901-201ENSMUST00000119001 283 ntBASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.7□□□□□ -1.82
Trim58Q5NCC9 Gm14600-201ENSMUST00000121032 630 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms