Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm9632-201ENSMUST00000195934 643 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm42465-201ENSMUST00000197036 492 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm43228-201ENSMUST00000200735 264 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm43659-201ENSMUST00000200894 628 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm8209-201ENSMUST00000206386 553 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm18892-201ENSMUST00000217628 881 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm23939-201ENSMUST00000082880 133 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm3940-201ENSMUST00000105087 432 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm13873-201ENSMUST00000119208 427 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm15026-201ENSMUST00000119219 458 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm24080-201ENSMUST00000175178 232 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Mir3112-201ENSMUST00000175431 82 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm22307-201ENSMUST00000180019 107 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm27999-201ENSMUST00000183539 193 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Mir6385-201ENSMUST00000184295 105 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm19641-201ENSMUST00000188432 417 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm34779-201ENSMUST00000210036 263 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm9712-201ENSMUST00000210842 311 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm7119-201ENSMUST00000221345 695 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Clhc1Q5M6W3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm14981-201ENSMUST00000117325 943 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm13087-201ENSMUST00000118298 256 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm11913-201ENSMUST00000119094 336 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm14600-201ENSMUST00000121032 630 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm23602-201ENSMUST00000157258 132 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm25058-201ENSMUST00000157365 128 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm24505-201ENSMUST00000157682 126 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm24960-201ENSMUST00000157923 90 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm37576-201ENSMUST00000194228 372 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm43043-201ENSMUST00000196579 412 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm7786-201ENSMUST00000210494 436 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm19563-201ENSMUST00000222031 270 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.18□□□□□ -1.9
Clhc1Q5M6W3 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm15159-201ENSMUST00000117062 764 ntBASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm13046-201ENSMUST00000117391 501 ntBASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm7308-201ENSMUST00000121087 447 ntBASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm14463-201ENSMUST00000121117 498 ntBASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm22034-201ENSMUST00000157283 134 ntBASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm23666-201ENSMUST00000158053 116 ntBASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Gm3123-201ENSMUST00000163480 480 ntBASIC3.17□□□□□ -1.9
Clhc1Q5M6W3 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms