Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir6408-201ENSMUST00000183643 91 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm27163-201ENSMUST00000184767 409 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm29576-201ENSMUST00000188020 678 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm28354-201ENSMUST00000190904 678 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm37288-201ENSMUST00000193963 334 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm44392-201ENSMUST00000196758 115 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm42850-201ENSMUST00000202094 201 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm44332-201ENSMUST00000203712 433 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Usp28Q5I043 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm19786-201ENSMUST00000222589 580 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Usp28Q5I043 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Usp28Q5I043 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Usp28Q5I043 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Usp28Q5I043 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm14368-201ENSMUST00000145305 415 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm6265-201ENSMUST00000149263 231 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm22277-201ENSMUST00000157204 277 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm22036-201ENSMUST00000157279 215 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm24190-201ENSMUST00000157976 216 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm24875-201ENSMUST00000158888 104 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm22252-201ENSMUST00000179316 79 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm7870-201ENSMUST00000184467 616 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm5268-201ENSMUST00000189212 940 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm37989-201ENSMUST00000195202 803 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm44513-201ENSMUST00000206811 439 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm44554-201ENSMUST00000208738 147 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.23□□□□□ -1.89
Usp28Q5I043 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Usp28Q5I043 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Usp28Q5I043 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Usp28Q5I043 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Usp28Q5I043 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.23□□□□□ -1.89
Usp28Q5I043 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Usp28Q5I043 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Usp28Q5I043 Gm15719-201ENSMUST00000120619 635 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 Gm6079-201ENSMUST00000121356 404 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Usp28Q5I043 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.22□□□□□ -1.89
Usp28Q5I043 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Usp28Q5I043 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm24376-201ENSMUST00000104399 127 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.21□□□□□ -1.9
Usp28Q5I043 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm15103-201ENSMUST00000119893 871 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm16445-201ENSMUST00000120399 714 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm12693-201ENSMUST00000121965 483 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm23716-201ENSMUST00000157348 144 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm23387-201ENSMUST00000158586 107 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm24681-201ENSMUST00000158760 107 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm24754-201ENSMUST00000177997 107 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm25360-201ENSMUST00000178786 191 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Usp28Q5I043 Mir6393-201ENSMUST00000183709 94 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Gm27330-201ENSMUST00000184689 132 ntBASIC3.21□□□□□ -1.9
Usp28Q5I043 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms