Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 Snord14c-201ENSMUST00000101927 86 ntBASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 Mir6418-201ENSMUST00000185075 115 ntBASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 Gm18704-201ENSMUST00000219736 446 ntBASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc88bQ4QRL3 Gm38255-201ENSMUST00000194910 2996 ntBASIC4.03□□□□□ -1.76
Ccdc88bQ4QRL3 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc88bQ4QRL3 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.03□□□□□ -1.76
Ccdc88bQ4QRL3 Gm15074-201ENSMUST00000117603 936 ntBASIC4.03□□□□□ -1.76
Ccdc88bQ4QRL3 Gm8338-201ENSMUST00000163928 363 ntBASIC4.03□□□□□ -1.76
Ccdc88bQ4QRL3 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc88bQ4QRL3 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc88bQ4QRL3 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Ccdc88bQ4QRL3 Gm22149-201ENSMUST00000104442 136 ntBASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Gm14977-201ENSMUST00000121626 812 ntBASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Gm24212-201ENSMUST00000158258 132 ntBASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Gm44408-201ENSMUST00000200205 66 ntBASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Gm44277-201ENSMUST00000205128 649 ntBASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Gm7588-201ENSMUST00000216866 571 ntBASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc88bQ4QRL3 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc88bQ4QRL3 Gm17072-201ENSMUST00000166673 658 ntBASIC4.01□□□□□ -1.77
Ccdc88bQ4QRL3 Gm28788-201ENSMUST00000189717 375 ntBASIC4.01□□□□□ -1.77
Ccdc88bQ4QRL3 Gm29558-201ENSMUST00000190134 375 ntBASIC4.01□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ccdc88bQ4QRL3 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.01□□□□□ -1.77
Ccdc88bQ4QRL3 Gm18359-201ENSMUST00000173024 1459 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Gm14988-201ENSMUST00000117224 1548 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Gm12956-201ENSMUST00000122184 414 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Gm44712-201ENSMUST00000206250 1076 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Gm18453-201ENSMUST00000208000 626 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 CT030135.1-201ENSMUST00000223760 570 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Gm44846-201ENSMUST00000207127 3243 ntBASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4□□□□□ -1.77
Ccdc88bQ4QRL3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm23010-201ENSMUST00000104151 126 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm16232-201ENSMUST00000162856 167 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm5358-201ENSMUST00000212814 353 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm8031-201ENSMUST00000213430 626 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm18346-201ENSMUST00000216782 325 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc88bQ4QRL3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm12871-201ENSMUST00000118758 438 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm14877-201ENSMUST00000119803 478 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm25048-201ENSMUST00000158598 91 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm44060-201ENSMUST00000204440 410 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm18871-201ENSMUST00000218655 745 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm22806-201ENSMUST00000082738 136 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm5268-201ENSMUST00000189212 940 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Gm2979-201ENSMUST00000193442 463 ntBASIC3.98□□□□□ -1.77
Ccdc88bQ4QRL3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Gm7974-201ENSMUST00000117154 408 ntBASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Gm23600-201ENSMUST00000157260 71 ntBASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Gm25902-201ENSMUST00000158493 318 ntBASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Gm24317-201ENSMUST00000178536 107 ntBASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Gm43722-201ENSMUST00000196054 124 ntBASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Gm6615-201ENSMUST00000199426 631 ntBASIC3.97□□□□□ -1.77
Ccdc88bQ4QRL3 Gm44521-201ENSMUST00000206469 217 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms