Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm16383-201ENSMUST00000118122 232 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm12090-201ENSMUST00000118692 758 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm23587-201ENSMUST00000157658 84 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm16147-201ENSMUST00000162143 373 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm32222-201ENSMUST00000203296 298 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm44399-201ENSMUST00000205043 226 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm18855-201ENSMUST00000206689 570 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm44857-201ENSMUST00000208331 196 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm23102-201ENSMUST00000083724 116 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm10212-201ENSMUST00000087884 324 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm8074-201ENSMUST00000095071 252 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm14795-201ENSMUST00000118461 471 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm2288-201ENSMUST00000118560 638 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm11446-201ENSMUST00000121319 866 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm22208-201ENSMUST00000122658 110 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm24061-201ENSMUST00000157489 120 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm24417-201ENSMUST00000178123 79 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm24653-201ENSMUST00000178541 79 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm25934-201ENSMUST00000178642 79 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm26915-201ENSMUST00000183080 748 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Mir8096-201ENSMUST00000184526 127 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm27477-201ENSMUST00000184649 143 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm27715-201ENSMUST00000184714 260 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm37098-201ENSMUST00000192290 244 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm6140-201ENSMUST00000192494 966 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm7897-201ENSMUST00000193981 554 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm44300-201ENSMUST00000196792 121 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm17917-201ENSMUST00000218561 953 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm9818-201ENSMUST00000050900 255 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm23975-201ENSMUST00000082685 106 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm26121-201ENSMUST00000083364 162 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm23846-201ENSMUST00000083835 107 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Upf3aQ3ULJ3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm14518-201ENSMUST00000117351 542 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm12739-201ENSMUST00000119769 382 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm11876-201ENSMUST00000120002 269 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm14463-201ENSMUST00000121117 498 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm11344-201ENSMUST00000122011 335 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm23205-201ENSMUST00000158671 103 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm20542-201ENSMUST00000174582 372 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Mir5127-201ENSMUST00000175295 71 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm28141-201ENSMUST00000186676 342 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm43704-201ENSMUST00000196164 496 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm42976-201ENSMUST00000200313 222 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 Gm30674-201ENSMUST00000214523 392 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.24□□□□□ -1.89
Upf3aQ3ULJ3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms