Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm43899-201ENSMUST00000203675 246 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm4528-201ENSMUST00000207905 551 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm29884-201ENSMUST00000218403 453 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm9973-202ENSMUST00000220926 166 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm2710-201ENSMUST00000073196 603 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm22304-201ENSMUST00000082688 129 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm23530-201ENSMUST00000104564 137 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm12636-201ENSMUST00000117395 624 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm13341-201ENSMUST00000120780 672 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm22985-201ENSMUST00000122754 116 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm23754-201ENSMUST00000157576 63 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm24768-201ENSMUST00000158512 94 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm24811-201ENSMUST00000175313 100 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm4761-201ENSMUST00000178086 582 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm20915-201ENSMUST00000191575 663 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm44058-201ENSMUST00000204335 467 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm44118-201ENSMUST00000204665 229 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm44513-201ENSMUST00000206811 439 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm24533-201ENSMUST00000083138 196 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Gm23460-201ENSMUST00000083258 109 ntBASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Trafd1Q3UDK1 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm25414-201ENSMUST00000101814 107 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm12149-201ENSMUST00000117511 654 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Gm24198-201ENSMUST00000157812 108 ntBASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms