Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm37416-201ENSMUST00000193596 318 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm23443-201ENSMUST00000082916 128 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Mir551b-201ENSMUST00000102165 98 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm24096-201ENSMUST00000103905 110 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm13046-201ENSMUST00000117391 501 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm11357-201ENSMUST00000119758 954 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm11718-201ENSMUST00000119942 537 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm12748-201ENSMUST00000120763 504 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm14101-201ENSMUST00000121502 473 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm11403-201ENSMUST00000122195 369 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm3370-201ENSMUST00000171785 500 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm23152-201ENSMUST00000175322 116 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm27599-201ENSMUST00000183758 174 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Mir6345-201ENSMUST00000184286 128 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm28648-201ENSMUST00000190092 343 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm43114-201ENSMUST00000198298 343 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm44990-201ENSMUST00000203922 217 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm19244-201ENSMUST00000204340 253 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm5548-201ENSMUST00000055878 397 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Brf2Q3UAW9 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm23256-201ENSMUST00000102235 110 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm26140-201ENSMUST00000103807 110 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm24281-201ENSMUST00000104234 136 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm25563-201ENSMUST00000104603 74 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm11577-201ENSMUST00000118030 737 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm6058-201ENSMUST00000154261 399 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm22908-201ENSMUST00000177620 110 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Mir6986-201ENSMUST00000184483 58 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm43652-201ENSMUST00000196219 675 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm43232-201ENSMUST00000201346 364 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm5322-201ENSMUST00000206142 699 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm44513-201ENSMUST00000206811 439 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Brf2Q3UAW9 Gm23932-201ENSMUST00000082914 107 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms