Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm7870-201ENSMUST00000184467 616 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Gm32340-201ENSMUST00000192883 259 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Gm37616-201ENSMUST00000193974 322 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Gm25203-202ENSMUST00000200458 216 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Gm45588-201ENSMUST00000211213 630 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Gm8681-201ENSMUST00000219115 618 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Gm25203-201ENSMUST00000082842 215 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Trim43aQ3TL54 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.12□□□□□ -1.91
Trim43aQ3TL54 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Mir499-201ENSMUST00000102357 79 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm14981-201ENSMUST00000117325 943 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm14159-201ENSMUST00000119832 451 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm12412-201ENSMUST00000121867 328 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm14804-201ENSMUST00000122322 508 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm24736-201ENSMUST00000158862 130 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm15508-201ENSMUST00000160330 325 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Mir6993-201ENSMUST00000184912 65 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm27249-201ENSMUST00000185049 328 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm7946-201ENSMUST00000203326 958 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.11□□□□□ -1.91
Trim43aQ3TL54 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Mir592-201ENSMUST00000102113 96 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm15001-201ENSMUST00000117657 795 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm14623-201ENSMUST00000121398 603 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm22208-201ENSMUST00000122658 110 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm6265-201ENSMUST00000149263 231 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21842-201ENSMUST00000177552 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21626-201ENSMUST00000177791 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21562-201ENSMUST00000177888 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21539-201ENSMUST00000177925 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17522-201ENSMUST00000178144 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21599-201ENSMUST00000178249 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21914-201ENSMUST00000178452 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21723-201ENSMUST00000178692 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21916-201ENSMUST00000178771 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21801-201ENSMUST00000178865 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21633-201ENSMUST00000178941 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17412-201ENSMUST00000179261 468 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21821-201ENSMUST00000179646 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21588-201ENSMUST00000180074 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21780-201ENSMUST00000180128 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21572-201ENSMUST00000180134 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm21529-201ENSMUST00000180175 498 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm18727-201ENSMUST00000185981 553 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm29370-202ENSMUST00000187476 499 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm17838-201ENSMUST00000205872 876 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.1□□□□□ -1.91
Trim43aQ3TL54 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms